workflow.sh slicer atlas.hdr warp2.warp anatomy4.img softmean anatomy1.hdr anatomy2.hdr anatomy3.hdr anatomy2.img reference.hdr reslice resliced3.hdr convert atlas-x.pgm atlas-x.gif convertb resliced2.img slicer resliced2.hdr convert convert delegates.mgk convertb atlas-z.gif atlas-z.pgm warp4.warp align_warp resliced4.hdr resliced3.img reference.img align_warp slicer align_warp reslice reslice convert convertb atlas-y.pgm atlas-y.gif warp1.warp reslice align_warp anatomy4.hdr anatomy1.img resliced4.img warp3.warp anatomy3.img resliced1.img resliced1.hdr atlas.img workflow.sh